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Course Code: 
FDE 206
Course Type: 
Area Elective
P: 
2
Lab: 
0
Credits: 
4
ECTS: 
8
Course Language: 
İngilizce
Course Objectives: 
This course is designed to give students an understanding of the role of microorganisms in food processing and preservation; relation of microorganisms to food spoilage, foodborne illness and intoxication, general food quality, and role of microorganisms in health promotion.
Course Content: 

Microorganisms found in foods, factors affecting the development of these organisms, indicator microorganisms used in foods, microorganisms and functions that show pathogenic properties in food, sources of transmission, diseases they create, control, laboratory diagnosis and examination in terms of food safety.

Course Methodology: 
1: Lecture by instructor, 2: Lecture by instructor with class discussion, 3: Problem solving by instructor, 4: Use of simulations, 5: Problem solving assignment, 6: Reading assignment, 7: Laboratory work, 8: Term research paper, 9: Presentation by guest
Course Evaluation Methods: 
A: Written exam, B: Multiple-choice exam C: Take-home quiz, D: Experiment report, E: Homework, F: Project, G: Presentation by student,

Vertical Tabs

Course Learning Outcomes

Course Learning Outcomes Detailed Program Outcomes Teaching Methods Assessment Methods
To ensure that the students gain basic food microbiology background at a theoretical as well as practical level 5b,6a,6c,7c,7e 1,2,4,6,7 A,B,C,D,E
To understand role of fermentation microorganisms in Food Industry  5b,6a,6c,7c,7e,8a,9a  
1,2,4,6,7
D,E
The ability to design and perform independent experiments in related with foodborne pathogens as well as to analyze and interpret the experimental results  5b,6a,6c,7b,7c,7e 1,2,4,6,7 A,B,D,E
The ability to identify microbial  problems during food processing and to determine critical control points, and to solve them using the most up-to-date techniques and tools  5b,6a,6c,7c,7e 1,2,4,6,7 A,B,D,E
The ability to identify food spoilage organisms and to solve the problem using the most up-to-date techniques and tools  5b,6a,6c,7c,7e,8a,9b 1,2,4,6,7 A,B,D,E
The capability to design and carry out experiments in food microbiology fields and thus to provide effective solutions to questions and problems that they may face in the future, and write report 5b,6a,6c,7c,7e 1,2,4,6,7 A,B,D,E

Course Flow

COURSE CONTENT
Week Topics Study Materials
1 Introduction to Food microbiology: past and present 
Laboratory: Laboratory Safety
Lecture Notes
Laboratory Notes
2 Parameters that affect microbial growth: Extrinsic and Intrinsic
Laboratory: Food Sampling and Sample Handling
Lecture Notes
Laboratory Notes
3 Indicator microorganisms 
Spores 

Laboratory: Dilution Calculations

Lecture Notes
Laboratory Notes
4 Foodborne illness: host factors, microbial factors
Laboratory: Culture Media Preparation and Cultivation of Bacteria
Lecture Notes
Laboratory Notes
5 Staphylococcus aureus 
Salmonella

Laboratory: Methods for Enumeration of Coliforms and E. coli in Water

Lecture Notes
Laboratory Notes
6 Clostridium botulinum,Clostridium perfringens, Bacillus cereus 
Listeria monocytogenes

 Laboratory: Enumeration of Molds and Yeasts in Tomato Paste

Lecture Notes
Laboratory Notes
7 Exam 1 Lecture Notes
8 Enterobacteriaceae
Escherichia coli 

Shigella 

Vibrio, Yersinia 

Laboratory: Sublethal injury of Staphylacoccus aureus

Lecture Notes
Laboratory Notes
9 H. pylori, C. jejuni, Viruses,Parasites, Protozoa, Molds and mycotoxins 
Laboratory: Identification of L.monocytogenes and Salmonella spp. by using rapid identification kits 
Lecture Notes
Laboratory Notes
10 Spoilage organisms in foods 
Food preservation: Low temperature, Drying and irradiation, Heat, MAP, Antimicrobial preservatives, etc.

Laboratory: Evaluation of data obtained from rapid identification of L.monocytogenes and Salmonella spp. 

Lecture Notes
Laboratory Notes
11 Exam 2 Lecture Notes
12 Fermentation
Lactic Acid Bacteria as starter Cultures

Laboratory: Fermentation and Bioreactors

Lecture Notes
Laboratory Notes
13 Food Safety Regulations
Laboratory: Yogurt Fermentation and Enumeration of Starter Cultures in Yoghurt
Lecture Notes
Laboratory Notes
14 Fast Identification Techniques
Food Security and biosecurity

Laboratory: Final Exam

Lecture Notes
Laboratory Notes

Recommended Sources

RECOMMENDED SOURCES
Textbook Slides, Lab Handouts (for experiments)
Additional Resources Modern Food Microbiology. Sixth Edition. J.M. Jay. Aspen Publishers, Inc., Gaithersburg, Maryland 2000. (Fourth and Fifth Editions are good as well).

Material Sharing

MATERIAL SHARING
Documents YULEARN
Assignments Turnitin/YULEARN
Exams  

Assessment

ASSESSMENT
IN-TERM STUDIES NUMBER PERCENTAGE
Mid-terms 2 30
Lab Quizes 9 15
Lab Reports 6 25
Total   70
CONTRIBUTION OF FINAL EXAMINATION TO OVERALL GRADE (20% Lecture final +10% Laboratory final)   30
CONTRIBUTION OF IN-TERM STUDIES TO OVERALL GRADE   70
Total   100

Course’s Contribution to Program

COURSE'S CONTRIBUTION TO PROGRAM OUTCOMES 
No Program Learning Outcomes check    √ 
1a Adequate knowledge in mathematics, science and engineering subjects pertaining to the relevant discipline,   
1b Ability to use theoretical and applied knowledge in these areas in complex engineering problems.  
2a Ability to identify, formulate, and solve complex engineering problems,  
2b Ability to select and apply proper analysis and modeling methods for this purpose.  
3a Ability to design a complex system, process, device or product under realistic constraints and conditions, in such a way as to meet the desired result,  
3b Ability to apply modern design methods for this purpose.  
4a Ability to devise, select and use modern techniques and tools needed for analyzing and solving complex problems encountered in engineering practice.   
4b Ability to employ information technologies effectively.  
5a Ability to design experiments for investigating complex engineering problems or discipline specific research questions,   
5b Ability to conduct experiments, gather data, analyze and interpret results for investigating complex engineering problems or discipline specific research questions.
6a Ability to work efficiently in intra-disciplinary teams, 
6b Ability to work efficiently in multi-disciplinary teams,  
6c Ability to work individually. 
7a Ability to communicate effectively in Turkish, both orally and in writing,  
7b Knowledge of a minimum of one foreign language, 
7c Ability to write effective reports and comprehend written reports, 
prepare design and production reports, 
7d Ability to make effective presentations,  
7e Ability to give and receive clear and intelligible instructions. 
8a Recognition of the need for lifelong learning, ability to access information, ability to follow developments in science and technology, 
8b Ability to continue to educate him/herself.
9a Consciousness to behave according to ethical principles and professional and ethical responsibility. 
9b Knowledge on standards used in engineering practice.
10a Knowledge about business life practices such as project management, risk management, change management.   
10b Awareness in entrepreneurship and innovation.   
10c Knowledge about sustainable development.  
11a Knowledge about the global and social effects of engineering practices on health, environment, and safety,
11b Knowledge about contemporary issues of the century reflected into the field of engineering.  
11c Awareness of the legal consequences of engineering solutions.   

ECTS

ECTS ALLOCATED BASED ON STUDENT WORKLOAD BY THE COURSE DESCRIPTION
Activities Quantity Duration
(Hour)
Total
Workload
(Hour)
Lecture  14 2 28
Laboratory 14 3 42
Laboratory Quizes 9 0.1 0.9
Laboratory Reports 6 9 54
Laboratory Results Screening 6 1 6
Midterm – Pre-study Exam 2 18 36
2 1 2
Final – Pre-study Exam 1 28 28
1 2 2
Total Work Load     198.9
Total Work Load / 25 (h)     7.88
ECTS Credit of the Course     8
None